I am experiencing some frustrating behavior after I tried to Batch to apply a macro to a folder of images. Now FIJI will not let me open images from this folder (and copies of this folder).
I’m pretty sure that I did the following
Analyze > Batch > Macro
I selected a folder containing images (.tif) and other files as the input and output path.
I pasted in my big macro into the text box, clicked Process.
An error was given right away because my macro was too big, and as far as I can tell – no output file was created.
Now when I try to open any of the files from this folder in FIJI, a ‘Bio-Formats Import Options’ window opens instead of my image (below). This error persists with a copied version of the folder.
Has this happened to other people? Does anyone have ideas of change what is going on? And how I can undo it?