Hi everyone. I have created a script that uses Trackmate to perform segmentation (blob detection) and track cells over a image sequence.
However turns out Trackmate is not doing a great job on the tracking part so I’m now using a custom Matlab code to do this.
I want to get rid of the tracking performed by Trackmate and only keep the blob detection part. How can I do this? I want to keep the blob detection algorithm, it works a lot better than anything I tried. Performing tracking takes too much time and sometimes crashes the application due to lack of memory, when the sequence is too long, or when there are too many spots.
Is there a way to use Trackmate only for blob detection and not perform tracking?
Is there a way to use the same blob detection algorithm without using Trackmate?