Looking for a headless HDF reader

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Actually, this plugin still does not work when fiji is run with “–headless” flag. This is caused by both HDF5ImageJ .loadDataSetsToHyperStack and HDF5ImageJ.loadCustomLayoutDataSetToHyperStack calling imp.show()


And now there is a PR https://github.com/fiji/HDF5_Vibez/pull/2 that fixes it.


The PR was merged, but I have not cut a new release yet. Will do so in the next batch of Fiji updates (typically every 4-12 weeks) unless you urgently desire it sooner.


A post was split to a new topic: Does HDF5_Vibez support external links in HDF5 files?