We are trying to extract AreaLists from .xml files to load into VTK for some further analysis that we don’t want to run in ImageJ. When we draw the arealists that we have managed to extract from the xml, each layer is represented as a dotted line that describes the contour of the segmented region. Could someone tell me how these dotted lines are derived from the original segmentated area so we can reconstruct the full AreaLists from them?
Also, as an aside, we are very curious as to why layer IDs are presented as multiples of 3, except for the first layer, which is 5, followed by 9, 12, 15, 18 etc. Just curious.