Because when I use Trackmate on Fiji, It's out of memory if I don't divide the input data to several parts, and I need to combine all output data files together to one. So recently, I am working on Java files that @tinevez provided on Github. The problem is when I run main.java, It's still running through Fiji. How should I do to make the trackmate running on Java rather than Fiji?
I think Fiji only supports loading all input first and do analyze together, and what I want to achieved on Java is running input a small section by a small section to get rid of memory outage.
Sorry if the question is unclear!